BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038E02LP1|AL430546
(939 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1004 1777 0.0
3x_Contig1795 153 7e-37
>3x_Contig1004
Length = 3994
Score = 1777 bits (896), Expect = 0.0
Identities = 933/941 (99%), Gaps = 5/941 (0%)
Strand = Plus / Plus
Query: 1 gatcaaatacactcaattagtcaatgggttgttatagacataagtatatatatagatatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1526 gatcaaatacactcaattagtcaatgggttgttatagacataagtatatatatagatatc 1585
Query: 61 ccgagcgattgaagtgtgataaagggaagaaaaaaggattaaaatgaaaaaaagagtcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1586 ccgagcgattgaagtgtgataaagggaagaaaaaaggattaaaatgaaaaaaagagtcaa 1645
Query: 121 ttccctagcttatttccttacaattcaccagacttagcgataacaattctggccttggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1646 ttccctagcttatttccttacaattcaccagacttagcgataacaattctggccttggta 1705
Query: 181 gcaccggaaccggaacccagggattcgaccttcttgacgacatcgaaaccatcagcgact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1706 gcaccggaaccggaacccagggattcgaccttcttgacgacatcgaaaccatcagcgact 1765
Query: 241 tcaccgaacacgacgtgcttaccatccaaccatgggcatggaacagtggtgatgaagaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1766 tcaccgaacacgacgtgcttaccatccaaccatgggcatggaacagtggtgatgaagaat 1825
Query: 301 tgagagccgttggtgtttggaccagcattggccatggacaacaaacctggcttttcgtgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1826 tgagagccgttggtgtttggaccagcattggccatggacaacaaacctggcttttcgtgc 1885
Query: 361 ttcttgacgaagttttcgtctgggaacttagcaccgtagatagacttaccaccgacacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1886 ttcttgacgaagttttcgtctgggaacttagcaccgtagatagacttaccaccgacacca 1945
Query: 421 gtaccgtgagttaagtcaccaccttgcaacatgaagtctgggataacacggtggaaaaca 480
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1946 gtaccgtgagtgaagtcaccaccttgcaacatgaagtctgggataacacggtggaaaaca 2005
Query: 481 gagccggcgtaaccgaaacccttttcaccagtagctagagctctgaagttttcagtagtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2006 gagccggcgtaaccgaaacccttttcaccagtagctagagctctgaagttttcagtagtc 2065
Query: 541 tttggaacaacatcgttgtacaattggaaaacaattctacccaatggttgaccgtcagct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2066 tttggaacaacatcgttgtacaattggaaaacaattctacccaatggttgaccgtcagct 2125
Query: 601 tccacgtcgaaaaataccttagacattcttagtttagtttagtagttgatacttggtgtg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2126 tccacgtcgaaaaataccttagacattcttagtttagtttagtagttgatacttggtgtg 2185
Query: 661 ttgtaaccaagattttgcaaaccagaacagaagagcaagaactggacttgaattggaatt 720
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2186 ttgtaaccaagattttgc-aaccagaacagaagagcaagaactggacttgaattggaatt 2244
Query: 721 ggattgaagttgaatcagagttcaattgagaaagtggttggtagttgctaacaaagggtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2245 ggattgaagttgaatcagagttcaattgagaaagtggttggtagttgctaacaaagggtg 2304
Query: 781 gcgttggcttcgc-aaaatggtattaggtgatgacatgcggccgggtaacgaaaacggaa 839
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2305 gcgttggcttcgcaaaaatggtattaggtgatgacatgcggccgggtaacgaaaacggaa 2364
Query: 840 accccattatcttacacatcaaccgcattgtcgccgcaagtcacgtgacacacgt-rctt 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2365 accccattatcttacacatcaaccgcattgtcgccgcaagtcacgtgacacacgtgactt 2424
Query: 899 gcattatttttgttaacatcgcaaggcacggagaaacatgc 939
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 2425 gcat--attttgttaacatcgcaaggcacggagaaacatgc 2463
>3x_Contig1795
Length = 38452
Score = 153 bits (77), Expect = 7e-37
Identities = 152/177 (85%)
Strand = Plus / Plus
Query: 238 acttcaccgaacacgacgtgcttaccatccaaccatgggcatggaacagtggtgatgaag 297
||||||||||| || ||||| ||||||||||||||||||||||| || |||||||||||
Sbjct: 20921 acttcaccgaagacaacgtgtttaccatccaaccatgggcatgggactgtggtgatgaaa 20980
Query: 298 aattgagagccgttggtgtttggaccagcattggccatggacaacaaacctggcttttcg 357
||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||| |
Sbjct: 20981 aattgggagccattggtgtttggaccagcgttggccatagacaacaaacctggcttagtg 21040
Query: 358 tgcttcttgacgaagttttcgtctgggaacttagcaccgtagatagacttaccaccg 414
||||||| |||||||||||| | ||| || ||||||||| || |||||||||
Sbjct: 21041 tgcttctcttggaagttttcgtcggcgaatttgttaccgtagatggatttaccaccg 21097
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7234
Number of Sequences: 1807
Number of extensions: 7234
Number of successful extensions: 81
Number of sequences better than 1.0e-20: 2
length of query: 939
length of database: 10,358,551
effective HSP length: 16
effective length of query: 923
effective length of database: 10,329,639
effective search space: 9534256797
effective search space used: 9534256797
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)